Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855373.1_cds_XP_016512820.1_25426
CDS Infomation

[gene=LOC107829867] [db_xref=GeneID:107829867] [protein=glutamate--glyoxylate aminotransferase 2-like] [protein_id=XP_016512820.1] [location=complement(join(65264..65369,65707..65863,65949..66040,66257..66321,66528..66593,66911..67042,67130..67303,67672..67830,67945..68032,68126..68207,68635..68752,68837..68902,70173..70289))] [gbkey=CDS]
Sequence

ATGTCATCTAAGCCGTTGGATTATGAAAATCTGAATGAAAATGTGAAGAAGTGTCAGTAT
GCCGTCAGAGGTGAGCTCTACCTTCGAGCTTCTCAACTTCAGAAGGAAGGAAAGAAGATT
ATATTCACAAATGTAGGTAATCCCCATGCCCTTGGACAGAAGCCGCTGACATTTCCGCGC
CAGGTTATTGCACTGTGCCAAGCTCCATTTTTGCTGGACGATCCTAATGTTGGACTCTTA
TTCCCTGCTGATGCAATTGCAAGGGCTAAACATTATCTTTCATTGAATTCTGGAGGTCTA
GGTGCTTATAGTGACTCCCGTGGCATTCCCGGAGTAAGGAAAGAAATTGCAGATTTCATC
GAGAGACGTGATGGATATCCAAGTGATCCAGAGCTCATATTTCTAACTGACGGTGCCAGC
AAAGGAATAATGCAGATCTTACATACCATCATTCGGGGGCCCAATGATGGGGTATTGGTC
CCGGTTCCACAGTATCCTCTATACTCCGCCACAATATCATTGTATGGGGGTTCTCTTGTT
CCATACTATCTTGAAGAGGCTGCAGACTGGGGTCTTGATATCAATGACCTTCGGCAATGT
ATTGGACAAGCCCGACAGAACGGAGTAACTGTACGCGCAATGGTGATTATAAACCCTGGA
AATCCTACTGGACAATGTCTTACTGAAGCAAATGTTAAACAAATATTACAATTCTGTCAC
CAAGAAAATTTGGTATTACTTGGAGACGAAGTTTATCAACAAAATATTTACCAAGATGAG
CATCCTTTCATAAGTGCAAGAAAGGTTTTAATGGATATGGGTCCACCCATAACCAAGGAG
CTTCAGCTCGTTTCATTTCATACGGTCTCTAAAGGTTATTGGGGTGAATGTGGACAGCGT
GGTGGATACTTTGAGATGACCAACATTCCTCCCAAGTCTGTTGAAGAGATATACAAGGTT
GCTTCGATATCACTCAGTCCAAATGTACCTGCACAAATATTTTTGGGATTAATGGCAAAC
CCGCCTAAGCCTGGAGATATCTCATATGATCAATTTGTCAGAGAAAGTAAAGGCATCCTT
GAGTCACTAAGGAGGAGGGCGCATCTAATGACCGACGGTTTCAATAGCTGCAGAAATGTA
GTTTGTAACTTCACAGAAGGTGCTATGTATTCCTTCCCACAAATACAATTGCCTCGTGGG
GTGATAGACGCTGCAAAGAAGCTCGGTAAAACTCCTGATGTTTTCTATTGTATCAAGCTG
TTGGAAGCAACAGGCATCTCTACTGTCCCCGGTTCAGGGTTTGGTCAAAAGGAAGGGGTG
TTCCACCTAAGAACAACTATCTTGCCAGCTGAAGAAGACATGCCTTCAATAATGGCTAGT
TTCAAAAAGTTCAACGATGATTTCATGGAGCAATATGAGTAG

Peptide Sequence

PEP ID

XP_016512820.1
PEP Infomation

PREDICTED: glutamate--glyoxylate aminotransferase 2-like [Nicotiana tabacum]
Sequence

MSSKPLDYENLNENVKKCQYAVRGELYLRASQLQKEGKKIIFTNVGNPHALGQKPLTFPR
QVIALCQAPFLLDDPNVGLLFPADAIARAKHYLSLNSGGLGAYSDSRGIPGVRKEIADFI
ERRDGYPSDPELIFLTDGASKGIMQILHTIIRGPNDGVLVPVPQYPLYSATISLYGGSLV
PYYLEEAADWGLDINDLRQCIGQARQNGVTVRAMVIINPGNPTGQCLTEANVKQILQFCH
QENLVLLGDEVYQQNIYQDEHPFISARKVLMDMGPPITKELQLVSFHTVSKGYWGECGQR
GGYFEMTNIPPKSVEEIYKVASISLSPNVPAQIFLGLMANPPKPGDISYDQFVRESKGIL
ESLRRRAHLMTDGFNSCRNVVCNFTEGAMYSFPQIQLPRGVIDAAKKLGKTPDVFYCIKL
LEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPSIMASFKKFNDDFMEQYE

Transcript Sequence

Gene sequence data has not been registered.